getLogLikelihoodC {selectKSigs} | R Documentation

## Calculate the value of the log-likelihood for given parameters

### Description

Calculate the value of the log-likelihood for given parameters

### Usage

    getLogLikelihoodC(
      vPatternList,
      vSparseCount,
      vF,
      vQ,
      fdim,
      signatureNum,
      sampleNum,
      patternNum,
      samplePatternNum,
      isBackground,
      vF0
    )

### Arguments

`vPatternList` | The list of possible mutation features (converted to a vector)
`vSparseCount` | The table showing (mutation feature, sample, the number of mutation) (converted to a vector)
`vF` | F (converted to a vector)
`vQ` | Q (converted to a vector)
`fdim` | a vector specifying the number of possible values for each mutation signature
`signatureNum` | the number of mutation signatures
`sampleNum` | the number of cancer genomes
`patternNum` | the number of possible combinations of all the mutation features
`samplePatternNum` | the number of possible combination of samples and mutation patternns
`isBackground` | the logical value showing whether a background mutaiton features is included or not
`vF0` | a background mutaiton features

### Value

a value

[Package selectKSigs version 1.6.0 Index]