easyLoad_IDRmerged {seqsetvis} | R Documentation

## easyLoad_IDRmerged loads "overlapped-peaks.txt" from IDR.

### Description

easyLoad_IDRmerged loads "overlapped-peaks.txt" from IDR.

### Usage

    easyLoad_IDRmerged(
      file_paths,
      file_names = NULL,
      n_cores = getOption("mc.cores", 1),
      max_idr = 0.05
    )

### Arguments

`file_paths` | character vector of paths to narrowPeak files. If named, those names will be used in output unless overriden by providing file_names.
`file_names` | character vector of names for output list. If not NULL will override any existing names for file_paths. Default is NULL.
`n_cores` | number of cores to use, uses mc.cores option if set or 1.
`max_idr` | maximum IDR value allowed

### Value

named list of GRanges

### Examples

    idr_file = system.file("extdata/test_idr.overlapped-peaks.txt",
        package = "seqsetvis", mustWork = TRUE)
    easyLoad_IDRmerged(idr_file)
    easyLoad_IDRmerged(idr_file, max_idr = .01)

[Package seqsetvis version 1.14.4 Index]