testEnrichmentFGSEA {sesame} | R Documentation

## testEnrichmentFGSEA uses the FGSEA test to estimate the association of a categorical variable against a continuous variable.

### Description

testEnrichmentFGSEA uses the FGSEA test to estimate the association of a categorical variable against a continuous variable.

### Usage

    testEnrichmentFGSEA(
      querySet,
      databaseSet,
      p.value.adj = FALSE,
      estimate.type = "ES"
    )

### Arguments

`querySet` | Vector of probes of interest (e.g., significant probes)
`databaseSet` | Vector of probes corresponding to a single database set of interest.
`p.value.adj` | Logical value indicating whether to report the adjusted p-value. (Default: FALSE).
`estimate.type` | String indicating the estimate to report. Optional. (Default: "ES").

### Value

A DataFrame with the estimate/statistic, p-value, and name of test for the given results.

[Package sesame version 1.12.9 Index]