medianTotalIntensity {sesame} | R Documentation

## Whole-dataset-wide Median Total Intensity (M+U)

### Description

The function takes one single `SigDF` and computes median intensity of M+U for each probe. This function outputs a single numeric for the median.

### Usage

    medianTotalIntensity(sdf, mask = TRUE)

### Arguments

`sdf` | a `SigDF`
`mask` | whether to mask probes using mask column

### Value

median of all intensities

### Examples

    sesameDataCache("EPIC") # if not done yet
    sdf <- sesameDataGet('EPIC.1.SigDF')
    medianTotalIntensity(sdf)

[Package sesame version 1.12.9 Index]