inferSexKaryotypes {sesame} | R Documentation

## Infer Sex Karyotype

### Description

The function takes a `SigDF` and infers the sex chromosome Karyotype and presence/absence of X-chromosome inactivation (XCI). chrX, chrY and XCI are inferred relatively independently. This function gives a more detailed look of potential sex chromosome aberrations.

### Usage

    inferSexKaryotypes(sdf)

### Arguments

`sdf` | a `SigDF`

### Value

Karyotype string, with XCI

### Examples

    sesameDataCache("EPIC") # if not done yet
    sdf <- sesameDataGet('EPIC.1.SigDF')
    inferSexKaryotypes(sdf)

[Package sesame version 1.12.9 Index]