plotVolcano {sesame} | R Documentation

## plotVolcano creates a volcano plot of -log2(p.value) and log(estimate) given data with fields estimate and p.value.

### Description

plotVolcano creates a volcano plot of -log2(p.value) and log(estimate) given data with fields estimate and p.value.

### Usage

    plotVolcano(data, title = NA, subtitle = NA, n.fdr = FALSE, alpha = 0.05)

### Arguments

`data` | DataFrame where each field is a database name with two fields for the estimate and p.value.
`title` | String representing the title label. Optional. (Default: NA)
`subtitle` | String representing the subtitle label. Optional. (Default: NA)
`n.fdr` | Integer corresponding to the number of comparisons made. Optional. (Default: NA).
`alpha` | Float representing the cut-off alpha value for the plot. Optional. (Default: 0.05)

### Value

ggplot volcano plot

### Examples

    data=data.frame(estimate=c(runif(10)), p.value=c(runif(10)))
    plotVolcano(data)

[Package sesame version 1.12.9 Index]