inferStrain {sesame} | R Documentation

## Infer strain information for mouse array

### Description

Infer strain information for mouse array

### Usage

    inferStrain(betas, strain_snp_table = NULL)

### Arguments

`betas` | beta value vector from which VAFs are extracted
`strain_snp_table` | if not given download the default from sesameData

### Value

a list of best guess, p-value of the best guess and the probabilities of all strains

### Examples

    sesameDataCache("MM285") # if not done yet
    sdf = sesameDataGet('MM285.1.SigDF')
    betas = getBetas(dyeBiasNL(noob(sdf)))
    inferStrain(betas)

[Package sesame version 1.12.9 Index]