DiffPosMax              DiffPosMax class
Metric                  Metric class
MetricFactory           MetricFactory object
RatioArea               RatioArea class
RatioIntersect          RatioIntersect class
RatioMaxMax             RatioMaxMax class
RatioNormalizedIntersect
                        RatioNormalizedIntersect class
SpearmanCorrelation     SpearmanCorrelation class
chr7Profiles            ChIP-Seq profiles of region
                        chr7:61968807-61969730 related to enhancers
                        H3K27ac and H3K4me1 (for demonstration purpose)
demoProfiles            ChIP-Seq profiles of region
                        chr7:61968807-61969730 related to enhancers
                        H3K27ac and H3K4me1 (for demonstration purpose)
diffPosMaxMethod        Difference between two profiles maximal peaks
                        positions
ratioAreaMethod         Ratio of profiles area between two profiles
ratioIntersectMethod    Ratio between the intersection area of two
                        profiles and the total area covered by those
                        profiles
ratioMaxMaxMethod       Ratio of profiles maximal peaks between two
                        profiles
similaRpeak-package     similaRpeak: Metrics to estimate a level of
                        similarity between two ChIP-Seq profiles
similarity              Calculate metrics which estimate the level of
                        similarity between two ChIP-Seq profiles
spearmanCorrMethod      Spearman's rho statistic of two profiles
