randomGeneSetDb {sparrow} | R Documentation

## Generates a fake GeneSetDb by sampling from features in a seas input.

### Description

I wrote this because initial fetching from msigdbr can be slow, and also having some weird crashes in the unit tests of bioc3.14-devel.

### Usage

    randomGeneSetDb(x, n = 10, bias = NULL, ...)

### Arguments

`x` | an input container to `seas()`
`n` | number of genesets
`bias` | column in `x` to bias the geneset creation by
`...` | pass through args

### Details

This is a helper function for development, and shouldn't be used by normal users of this package.

### Value

A randomly generated GeneSetDb you can use against `x` for testing.

### Examples

    gdb.rando <- randomGeneSetDb(exampleDgeResult(), 10, bias = "t")

[Package sparrow version 1.0.3 Index]