logFC {sparrow} | R Documentation

## Extract the individual fold changes statistics for elements in the expression object.

### Description

Extract the individual fold changes statistics for elements in the expression object.

### Usage

    logFC(x, as.dt = FALSE)

### Arguments

`x` | A `SparrowResult()`
`as.dt` | If `FALSE` (default), the data.frame like thing that this funciton returns will be set to a data.frame. Set this to `TRUE` to keep this object as a `data.table`

### Value

The log fold change 'data.table“

### Examples

    vm <- exampleExpressionSet(do.voom=TRUE)
    gdb <- exampleGeneSetDb()
    mg <- seas(vm, gdb, design = vm$design, contrast = 'tumor')
    lfc <- logFC(mg)

[Package sparrow version 1.0.3 Index]