Package: spicyR
Type: Package
Title: Spatial analysis of in situ cytometry data
Version: 1.6.0
Authors@R: c(person("Nicolas", "Canete", email = "nicolas.canete@sydney.edu.au",
    role = c("aut")),
    person("Ellis", "Patrick", email = "ellis.patrick@sydney.edu.au",
    role = c("aut", "cre")))
Description: spicyR provides a series of functions to aid in the analysis of both 
    immunofluorescence and mass cytometry imaging data as well as other assays that 
    can deeply phenotype individual cells and their spatial location.
License: GPL (>=2)
biocViews: SingleCell, CellBasedAssays
Encoding: UTF-8
Depends: R (>= 4.1)
VignetteBuilder: knitr
BugReports: https://github.com/ellispatrick/spicyR/issues
Imports: ggplot2, concaveman, BiocParallel, spatstat.core,
        spatstat.geom, lmerTest, BiocGenerics, S4Vectors, lme4,
        methods, mgcv, pheatmap, rlang, grDevices, IRanges, stats,
        data.table, dplyr, tidyr, scam
Suggests: BiocStyle, knitr, rmarkdown
RoxygenNote: 7.1.1
git_url: https://git.bioconductor.org/packages/spicyR
git_branch: RELEASE_3_14
git_last_commit: ef4f5a5
git_last_commit_date: 2021-10-26
Date/Publication: 2021-10-26
NeedsCompilation: no
Packaged: 2021-10-27 04:10:48 UTC; biocbuild
Author: Nicolas Canete [aut],
  Ellis Patrick [aut, cre]
Maintainer: Ellis Patrick <ellis.patrick@sydney.edu.au>
Built: R 4.1.1; ; 2021-10-27 13:35:50 UTC; windows
