testGR {spiky} | R Documentation

## a test GRanges with UMI'ed genomic sequences used as controls

### Description

Sources and overlap widths of various read sequences in a test CRAM.

### Usage

    data(testGR)

### Format

A GRanges object with an mcols() DataFrame containing

UMI1

  the unique molecular identifier on the forward read

UMI2

  the unique molecular identifier on the reverse read

seq

  the sequence of the fragment

name

  the name of the fragment

score

  whether the fragment passes filters (always 1)

### Source

Generated using inst/script/loadTest.R

[Package spiky version 1.0.0 Index]