parse_spike_UMI {spiky} | R Documentation

## parse out the forward and reverse UMIs and contig for a BED/BAM

### Description

parse out the forward and reverse UMIs and contig for a BED/BAM

### Usage

    parse_spike_UMI(UMI, pos = NULL, seqs = NULL)

### Arguments

`UMI` | a vector of UMIs
`pos` | optional vector of positions (else all are set to 1)
`seqs` | optional vector of read sequences (else widths default to 96)

### Value

a GRanges

[Package spiky version 1.0.0 Index]