phage {spiky} | R Documentation

## lambda and phiX phage sequences, sometimes used as spike-ins

### Description

A DataFrame with sequence, methylated, CpGs, GCfrac, and OECpG for phages

### Usage

    data(phage)

### Format

A DataFrame object with

sequence

  genome sequence, as a DNAStringSet

methylated

  whether CpGs are methylated, as an integer

CpGs

  the number of CpGs in the phage genome, as an integer

GCfrac

  the GC fraction of the phage genome, as a numeric

OECpG

  the observed / expected CpG fraction, as a numeric

### Source

www.ncbi.nlm.nih.gov/genbank/

[Package spiky version 1.0.0 Index]