hpa_mouse_genes {surfaltr} | R Documentation

## SurfaltR Gene Name and Transcript ID Test Data- Highly Expressed Mouse Alternative Transcripts

### Description

For the gene name and transcript ID input, we have included 5 unique mouse transcripts from 5 different genes annotated as alternative by APPRIS. These genes were derived from supplementary data 12 from Uhlén et all 2015. This data has been formatted to be compatible with the package and to match the genes in the HPA human gene dataset.

### Usage

    hpa_mouse_genes

### Format

A data frame with 5 rows and 2 variables:

gene_name

  Gene name corresponding to transcript ID

transcript

  transcript ID of gene of interest

...

### Source

https://science.sciencemag.org/content/347/6220/1260419/tab-figures-data

[Package surfaltr version 1.0.0 Index]