ensembl_db_retrieval {surfaltr} | R Documentation

## Retrieve Transcript Information from Ensembl for all Primary Transcripts

### Description

This function retrieves all the primary transcripts in the given organism and their corresponding gene names, APPRIS annotations, and UniProt IDs.

### Usage

    ensembl_db_retrieval(organism)

### Arguments

`organism` | String indicating if mouse or human transcripts should be retrieved

### Value

A data frame containing the gene names, transcript IDs, APPRIS annotations, UniProt Swissprot IDs, UniProt Swissprot isoform IDs, and UniProt TREMBL IDs for all the primary transcripts in an organism.

[Package surfaltr version 1.0.0 Index]