ChrMapLinearMResult-class {Category} | R Documentation |
This class represents the results of a linear model-based test for
systematic changes in a per-gene statistic by chromosome band
annotation. The linearMTest
function returns an
instance of ChrMapLinearMResult
when given a parameter object
of class ChrMapLinearMParams
. Most slots can be queried using
accessors.
Objects can be created by calls of the form
new("ChrMapLinearMResult", ...)
, but is more commonly created
by callinf linearMTest
pvalue.order
:"integer"
~~ conditional
:"logical"
~~ chrGraph
:"graph"
~~ pvalues
:"numeric"
~~ effectSize
:"numeric"
~~ catToGeneId
:"list"
~~ annotation
:"character"
~~ geneIds
:"ANY"
~~ testName
:"character"
~~ pvalueCutoff
:"numeric"
~~ minSize
:"integer"
~~ testDirection
:"character"
~~
Class "LinearMResult"
, directly.
Class "LinearMResultBase"
, by class
"LinearMResult", distance 2.
signature(r = "ChrMapLinearMResult")
: ... signature(r = "ChrMapLinearMResult")
: ... signature(r = "ChrMapLinearMResult")
: ... Deepayan Sarkar
linearMTest
, ChrMapLinearMParams
,
LinearMResult
,
LinearMResultBase
,
showClass("ChrMapLinearMResult")