parseKGML2Graph {KEGGgraph} | R Documentation |
This function is a wrapper for parseKGML and KEGGpathway2Graph. It
takes two actions: first it reads in the KGML file and parses it into an object of
KEGGPathway-class
, the second step it calls
KEGGpathway2Graph
function to return the graph model.
parseKGML2Graph(file, ...)
file |
Name of KGML file |
... |
other parameters passed to KEGGpathway2Graph, see
KEGGpathway2Graph |
A graph object.
Jitao David Zhang mailto:j.zhang@dkfz.de
sfile <- system.file("extdata/hsa04010.xml",package="KEGGgraph") gR <- parseKGML2Graph(sfile,expandGenes=TRUE) gR