pBase {PAnnBuilder} | R Documentation |
This function define class and create new object.
pBase(srcUrl, parser, built="", fromWeb=TRUE, organism)
srcUrl |
a character string for the url where data file will be retained. |
parser |
a character string for the path of the parser file. |
built |
a character string for the release/version information of source data. |
fromWeb |
a boolean to indicate whether the source data will be downloaded from the web or read from a local file |
organism |
a character string for the name of the organism of concern. (eg: "Homo sapiens") |
Bioconductor "AnnBuilder" package define a class "pubRepo". Here we define a subclass of "pubRepo" called "pBase". "pBase" is used to process data from SwissProt, TREMBL, IPI, NCBI RefSeq databases.
pBase
return a object of "pBase" class.
Hong Li