aqmobj.nuse-class {arrayQualityMetrics} | R Documentation |
Class to contain data generated from aqm.nuse.
Description
Class to contain data generated from aqm.nuse.
Details
See the aqm.prepaffy help or the aqm Vignette for example of this object.
Slots
plot
:- A matrix to be represented calling the
aqm.plot
function.
type
:- A character string with a name for the section
the plot belongs to in the report.
title
:- A character string with the title of the plot
to be written in the report.
legend
:- A character string with the legend of the plot
to be written in the report.
scores
:- A numeric for each array corresponding to the
scores assessed from the plot.
outliers
:- List or integer of the arrays that are
outliers using boxplot.stats on the scores.
shape
:- A character "square" or "rect" depending on
the aspect ratio desired in the report.
Author(s)
Audrey Kauffmann <audrey@ebi.ac.uk>
See Also
aqm.nuse
, aqm.plot
[Package
arrayQualityMetrics version 2.2.3
Index]