aqm.rle {arrayQualityMetrics}R Documentation

Performs RLE plot on aqmobj.prepaffy objects.

Description

aqm.rle performs RLE boxplots and outlier detection from it and formats the output for aqm.plot usage.

Usage

 aqm.rle(affyproc, ...) 

Arguments

affyproc An object of class aqmobj.prepaffy
... Any arguments to Mbox

Details

See the aqm.prepaffy help or the aqm Vignette for example of this object.

Value

An object of class aqmobj.rle

Author(s)

Audrey Kauffmann <audrey@ebi.ac.uk>

See Also

aqm.prepaffy, aqmobj.prepaffy, aqmobj.rle


[Package arrayQualityMetrics version 2.2.3 Index]