aqm.maplot {arrayQualityMetrics}R Documentation

Performs MA-plots on aqmobj.prepdata objects.

Description

aqm.maplot performs MA-plots, outlier detection from it and formats the output for aqm.plot usage.

Usage

 aqm.maplot(dataprep, ...) 

Arguments

dataprep An object of class aqmobj.prepdata
... Any arguments to panel.smoothScatter

Details

See the aqm.prepdata help or the aqm Vignette for example of this object.

Value

An object of class aqmobj.ma.

Author(s)

Audrey Kauffmann <audrey@ebi.ac.uk>

See Also

aqm.prepdata, aqmobj.prepdata, aqmobj.ma


[Package arrayQualityMetrics version 2.2.3 Index]