getData {edgeR} | R Documentation |
Returns the data
slot of a DGEList object
getData(object)
object |
list containing the raw data with elements data (table of counts), group (vector indicating group) and lib.size (vector of library sizes) |
matrix of data (presumably integers)
Mark Robinson, Davis McCarthy
# generate raw data from NB, create list object y<-matrix(rnbinom(20,size=1,mu=10),nrow=5) d<-DGEList(data=y,group=rep(1:2,each=2),lib.size=rep(c(1000:1001),2)) # should be 5x4 print(dim(getData(d)))