filterResultList-class {flowCore}R Documentation

Class "filterResultList"

Description

Container to store the result of applying a filter on a flowSet object

Objects from the Class

Objects are created by applying a filter on a flowSet. The user doesn't have to deal with manual object instantiation.

Slots

.Data:
Object of class "list". The class directly extends list, and this slot holds the list data.
frameId:
Object of class "character" The IDs of the flowFrames in the filtered flowSet.
filterDetails:
Object of class "list". Since filterResultList inherits from filterResult, this slot has to be set. It contains only the input filter.
filterId:
Object of class "character". The identifier for the object.

Extends

Class "list", from data part. Class "filterResult", directly. Class "concreteFilter", by class "filterResult", distance 2. Class "filter", by class "filterResult", distance 3.

Methods

[
signature(x = "filterResultList", i = "ANY"): Subset to filterResultList.
[[
signature(x = "filterResultList", i = "ANY"): Subset to individual filterResult.
names
signature(x = "filterResultList"): Accessor to the frameId slot.
parameters
signature(object = "filterResultList"): Return parameters on which data has been filtered.
show
signature(object = "filterResultList"): Print details about the object.
split
signature(x = "flowSet", f = "filterResultList"): Split a flowSet based on the results in the filterResultlIst. See split for details.
summary
signature(object = "filterResultList"): Summarize the filtering operation. This creates a filterSummaryList object.

Author(s)

Florian Hahne

See Also

filter, filterResult, logicalFilterResult, multipleFilterResult, randomFilterResult

Examples


## Loading example data and creating a curv1Filter
data(GvHD)
dat <- GvHD[1:3]
c1f <- curv1Filter(filterId="myCurv1Filter", x=list("FSC-H"), bwFac=2)

## applying the filter
fres <- filter(dat, c1f)
fres

## subsetting the list
fres[[1]]
fres[1:2]

## details about the object
parameters(fres)
names(fres)
summary(fres)

## splitting based on the filterResults
split(dat, fres)
 

[Package flowCore version 1.10.0 Index]