ORF2Entrez {gene2pathway} | R Documentation |
Conversion locus tag -> Entrez ID and Entrez ID -> locus tag according to KEGG (see <URL:ftp://ftp.genome.jp/pub/kegg/genes/organisms/>)
ORF2Entrez(ORFIDs, organism="dme") Entrez2ORF(entrezIDs, organism="dme")
ORFIDs |
character vector of locus tags / ORF identifiers |
organism |
KEGG letter code describing an organism. Please refer to <URL:http://www.genome.jp/kegg-bin/create_kegg_menu> for a complete list of organisms (and their letter codes) supported by KEGG. |
entrezIDs |
character vector of Entrez gene IDs |
character vector
entrez=ORF2Entrez("Dmel_CG4942", organism="dme") Entrez2ORF(entrez, organism="dme") # should be "Dmel_CG4942"