AffyExpressionPDInfoPkgSeed-class {pdInfoBuilder}R Documentation

Class "AffyExpressionPDInfoPkgSeed"

Description

PD Info Package Seed for Affymetrix Expression Arrays

Objects from the Class

Objects can be created by calls of the form new("AffyExpressionPDInfoPkgSeed", cdfFile, csvAnnoFile, tabSeqFile, ...).

Slots

cdfFile:
CDF filename
celFile:
CEL filename
tabSeqFile:
TAB sequence file
chipName:
Name of the chip or platform
manufacturer:
chip/platform manufacturer
url:
chip URL
genomebuild:
The genome build this platform is based upon.
organism:
organism for chip.
species:
species for chip.
version:
A character vector giving the version number of the package.
license:
The license of the package
author:
Author of the package
email:
An email address to use in the Maintainer field
biocViews:
Character data for the biocViews field of the DESCRIPTION file

Methods

chipName
chipName
getGeometry
initialize
makePdInfoPackage
package creator

Examples

showClass("AffyExpressionPDInfoPkgSeed")

[Package pdInfoBuilder version 1.8.1 Index]