qpHist {qpgraph} | R Documentation |
Plots the distribution of non-rejection rates.
qpHist(nrrMatrix, K=NULL, titlehist = "all estimated\nnon-rejection rates", freq=TRUE)
nrrMatrix |
matrix of non-rejection rates. |
K |
concentration matrix of the generative distribution (whenever available). |
titlehist |
main title of the histogram(s). |
freq |
logical; if TRUE, the histograms show frequencies (counts) of occurrence of the different non-rejection rate values; if FALSE, then probability densities are plotted |
This function plots histograms using the R-function hist
and therefore
the way they are displayed follows that of this R-function.
None
R. Castelo and A. Roverato
Castelo, R. and Roverato, A. A robust procedure for Gaussian graphical model search from microarray data with p larger than n, J. Mach. Learn. Res., 7:2621-2650, 2006.
qpNrr
qpAvgNrr
qpEdgeNrr
qpGraphDensity
qpClique
nVar <- 50 # number of variables maxCon <- 5 # maximum connectivity per variable nObs <- 30 # number of observations to simulate I <- qpRndGraph(n.vtx=nVar, n.bd=maxCon) K <- qpI2K(I) X <- qpSampleMvnorm(K, nObs) nrr.estimates <- qpNrr(X, q=5, verbose=FALSE) qpHist(nrr.estimates, K)