MAT {rMAT}R Documentation

This object contains an ExpressionSet

Description

An object summarizing the output from the MAT function with the following slots : genomeName,featurePosition,featureChromosome,score,regIndex,method,threshold

Usage


        
NewMAT<-new('MAT', genomeName="Sc", featurePosition, featureChromosome, score, regIndex, method, threshold)

Author(s)

Charles Cheung, cykc@interchange.ubc.ca and Raphael Gottardo, raphael.gottardo@ircm.qc.ca Arnaud Droit, arnaud.droit@ircm.qc.ca

References

Lo, K., Brinkman, R. R. and Gottardo, R. (2008) Automated Gating of Flow Cytometry Data via Robust Model-based Clustering. Cytometry A 73, 321-332.

See Also

tilingSet

Examples

        
#       genomeName="Sc03b_MR_v04"
#       featurePosition="4"
#       featureChromosome="chr1"
#       score="8.8623"
#       regIndex="177"
#       method=""
#       threshold="5"

#NewMAT<-new('MAT', genomeName="Sc", featurePosition, featureChromosome, score, regIndex, method, threshold)
        

[Package rMAT version 1.1.2 Index]