parentChild-class {topGO}R Documentation

Classes "parentChild" and "pC"

Description

~~ A concise (1-5 lines) description of what the class is. ~~

Objects from the Class

Objects can be created by calls of the form new("parentChild", testStatistic, name, groupMembers, parents, sigMembers, joinFun, ...). ~~ describe objects here ~~

Slots

splitIndex:
Object of class "integer" ~~
joinFun:
Object of class "character" ~~
significant:
Object of class "integer" ~~
name:
Object of class "character" ~~
allMembers:
Object of class "character" ~~
members:
Object of class "character" ~~
testStatistic:
Object of class "function" ~~
testStatPar:
Object of class "list" ~~

Extends

Class "classicCount", directly. Class "groupStats", by class "classicCount", distance 2.

Methods

allMembers<-
signature(object = "parentChild"): ...
allMembers
signature(object = "parentChild"): ...
allParents
signature(object = "parentChild"): ...
getSigGroups
signature(object = "topGOdata", test.stat = "parentChild"): ...
initialize
signature(.Object = "parentChild"): ...
joinFun
signature(object = "parentChild"): ...
numAllMembers
signature(object = "parentChild"): ...
numSigAll
signature(object = "parentChild"): ...
sigAllMembers
signature(object = "parentChild"): ...
sigMembers<-
signature(object = "parentChild"): ...
updateGroup
signature(object = "parentChild", name = "missing", members = "character"): ...

Author(s)

Adrian Alexa

See Also

classicCount-class, groupStats-class, getSigGroups-methods

Examples

showClass("parentChild")
showClass("pC")

[Package topGO version 1.12.0 Index]