score_fun {xcms} | R Documentation |
A similarity scoring function for MS/MS spectra against a reference.
score_fun(ref, exp, method="distMatrix", ...)
ref |
An array of numbers for the refference |
exp |
An array of numbers for the test |
method |
A string of either 'distMatrix' or 'cor' |
... |
Any other arguments to be passed to other functions |
This is a starting method to score MS/MS data. Which reports the parameters to the various one of the scoreing functions.
score |
Percentage score between the two arrays |
H. Paul Benton, hpbenton@scripps.edu
H. Paul Benton, D.M. Wong, S.A.Strauger, G. Siuzdak "XCMS^2:" Analytical Chemistry 2008 DOI:http://pubs.acs.org/doi/abs/10.1021/ac800795f/
score_fun.distMatrix
,
score_fun.cor