Last updated on 2024-05-04 05:51:04 CEST.
Package | ERROR | OK |
---|---|---|
pulseTD | 3 | 9 |
Current CRAN status: ERROR: 3, OK: 9
Version: 0.1.0
Check: package dependencies
Result: ERROR
Packages required but not available:
'AnnotationDbi', 'SummarizedExperiment', 'Rsamtools',
'GenomicFeatures', 'GenomicAlignments'
Package suggested but not available for checking: ‘TxDb.Hsapiens.UCSC.hg19.knownGene’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.1.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘TxDb.Hsapiens.UCSC.hg19.knownGene’
Flavors: r-release-macos-arm64, r-release-macos-x86_64
Version: 0.1.0
Check: examples
Result: ERROR
Running examples in ‘pulseTD-Ex.R’ failed
The error most likely occurred in:
> ### Name: estimateExpression
> ### Title: Estimated Expression
> ### Aliases: estimateExpression
>
> ### ** Examples
>
> library(TxDb.Hsapiens.UCSC.hg19.knownGene)
Error in library(TxDb.Hsapiens.UCSC.hg19.knownGene) :
there is no package called ‘TxDb.Hsapiens.UCSC.hg19.knownGene’
Execution halted
Flavors: r-release-macos-arm64, r-release-macos-x86_64
Version: 0.1.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘tutorial.Rmd’ using rmarkdown
Quitting from lines 63-65 [import packages] (tutorial.Rmd)
Error: processing vignette 'tutorial.Rmd' failed with diagnostics:
there is no package called 'TxDb.Hsapiens.UCSC.hg19.knownGene'
--- failed re-building ‘tutorial.Rmd’
SUMMARY: processing the following file failed:
‘tutorial.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-arm64
Version: 0.1.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘tutorial.Rmd’ using rmarkdown
Quitting from lines at lines 63-65 [import packages] (tutorial.Rmd)
Error: processing vignette 'tutorial.Rmd' failed with diagnostics:
there is no package called 'TxDb.Hsapiens.UCSC.hg19.knownGene'
--- failed re-building ‘tutorial.Rmd’
SUMMARY: processing the following file failed:
‘tutorial.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-x86_64