pfamTC2AC {PFAM} | R Documentation

## Mappings from Trusted cutoff to Accession number

### Description

Mapping function from Trusted cutoff (TC) to the associated Accession number (AC)

### Usage

    pfamTC2AC(tc=NULL)

### Arguments

`tc` | A character vector of Trusted cutoff or NULL (default)

### Details

If `tc` is a vector of Trusted cutoff, pfamTC2AC will return a list of associated Accession number for the given `tc`. If `tc` is NULL, pfamTC2AC(tc=NULL) (or pfamTC2AC()) will return a list of associated Accession number for all the Trusted cutoff in the database. Extra information: None More Details: None

### Value

A list of Accession number.

### Author(s)

Ting-Yuan Liu

### References

http://www.sanger.ac.uk/Software/Pfam/ and ftp://ftp.sanger.ac.uk/pub/databases/Pfam/current_release/userman.txt

### Examples

    ## Not run:
        TC2AC <- pfamTC2AC()
        head(TC2AC)
        pfamTC2AC(tc=sample(names(TC2AC), 3))
    ## End(Not run)

[Package PFAM version 1.12.0 Index]