\HeaderA{ratLLMappingsGO2LL}{An annotation data that maps Gene Ontology identifiers to
LocusLink identifiers}{ratLLMappingsGO2LL}
\keyword{datasets}{ratLLMappingsGO2LL}
\begin{Description}\relax
ratLLMappingsGO2LL maps Gene Ontology (GO) ids to LocusLink ids for genes
whose products have the functions corresponding to the GO ids
\end{Description}
\begin{Details}\relax
This is an environment object containing key and value pairs. Keys are
GO ids and values are LocusLink ids. Values are vectors of length 1 or
more depending on whether a GO id can be mapped to one or more
LocusLink ids. Names of values are evidence code that indicate the
type of evidences that support associations between genes and GO
functions. 

The evidence codes in use include:

IMP: inferred from mutant phenotype  
IGI: inferred from genetic interaction
IPI: inferred from physical interaction  
ISS: inferred from sequence similarity 
IDA: inferred from direct assay  
IEP: inferred from expression pattern  
IEA: inferred from electronic annotation  
TAS: traceable author statement  
NAS: non-traceable author statement  
ND: no biological data available  
IC: inferred by curator

Mappings were derived from data provided by:

Entrez Gene: Not available

Package built: Sat Mar 25 23:16:08 2006
\end{Details}
\begin{References}\relax
\url{ftp://ftp.ncbi.nih.gov/refseq/LocusLink/LL_tmpl.gz}
\end{References}
\begin{Examples}
\begin{ExampleCode}
        require("annotate") || stop("annotate unavailable")
        xx <- as.list(ratLLMappingsGO2LL)
        if(length(xx) > 0){
                # Get the value of the first key
                xx[[1]]
                # Get the values  for a few keys
                if(length(xx) >= 3){
                        xx[1:3]
                }
        }
\end{ExampleCode}
\end{Examples}

