filterClones             package:snapCGH             R Documentation

_F_i_l_t_e_r _c_l_o_n_e_s _f_r_o_m _s_a_m_p_l_e

_D_e_s_c_r_i_p_t_i_o_n:

     Function for filtering clones via a user defined function.

_U_s_a_g_e:

             filterClones(MA, filterFunc, ...)

_A_r_g_u_m_e_n_t_s:

      MA: An object of class 'MAList'

filterFunc: A user specified function that accepts an MAList  and
          returns the indices of the clones to be removed.

     ...: Additional arguments to be passed to the filter function.

_D_e_t_a_i_l_s:

     Any clones identified by the filter function are turned into NA's.
     These are then removed or imputed within the 'processCGH'
     function.

_A_u_t_h_o_r(_s):

     Mike Smith

