pfamINTERPRO2AC {PFAM} | R Documentation

## Mappings from INTERPRO ID to Accession number

### Description

Mapping function from INTERPRO ID (INTERPRO) to the associated Accession number (AC)

### Usage

    pfamINTERPRO2AC(interpro=NULL)

### Arguments

`interpro` | A character vector of INTERPRO ID or NULL (default)

### Details

If `interpro` is a vector of INTERPRO ID, pfamINTERPRO2AC will return a list of associated Accession number for the given `interpro`. If `interpro` is NULL, pfamINTERPRO2AC(interpro=NULL) (or pfamINTERPRO2AC()) will return a list of associated Accession number for all the INTERPRO ID in the database. Extra information: None More Details: http://www.ebi.ac.uk/interpro/

### Value

A list of Accession number.

### Author(s)

Ting-Yuan Liu

### References

http://www.sanger.ac.uk/Software/Pfam/ and ftp://ftp.sanger.ac.uk/pub/databases/Pfam/current_release/userman.txt

### Examples

    ## Not run:
        INTERPRO2AC <- pfamINTERPRO2AC()
        head(INTERPRO2AC)
        pfamINTERPRO2AC(interpro=sample(names(INTERPRO2AC), 3))
    ## End(Not run)

[Package PFAM version 1.14.1 Index]