pfamDE2AC {PFAM} | R Documentation

## Mappings from Definition to Accession number

### Description

Mapping function from Definition (DE) to the associated Accession number (AC)

### Usage

    pfamDE2AC(de=NULL)

### Arguments

`de` | A character vector of Definition or NULL (default)

### Details

If `de` is a vector of Definition, pfamDE2AC will return a list of associated Accession number for the given `de`. If `de` is NULL, pfamDE2AC(de=NULL) (or pfamDE2AC()) will return a list of associated Accession number for all the Definition in the database. Extra information: None More Details: None

### Value

A list of Accession number.

### Author(s)

Ting-Yuan Liu

### References

http://www.sanger.ac.uk/Software/Pfam/ and ftp://ftp.sanger.ac.uk/pub/databases/Pfam/current_release/userman.txt

### Examples

    ## Not run:
        DE2AC <- pfamDE2AC()
        head(DE2AC)
        pfamDE2AC(de=sample(names(DE2AC), 3))
    ## End(Not run)

[Package PFAM version 1.14.1 Index]