pfamPFAMB2AC {PFAM} | R Documentation

## Mappings from PFAMB ID to Accession number

### Description

Mapping function from PFAMB ID (PFAMB) to the associated Accession number (AC)

### Usage

    pfamPFAMB2AC(pfamb=NULL)

### Arguments

`pfamb` | A character vector of PFAMB ID or NULL (default)

### Details

If `pfamb` is a vector of PFAMB ID, pfamPFAMB2AC will return a list of associated Accession number for the given `pfamb`. If `pfamb` is NULL, pfamPFAMB2AC(pfamb=NULL) (or pfamPFAMB2AC()) will return a list of associated Accession number for all the PFAMB ID in the database. Extra information: None More Details: Pfam-B is an automatic clustering of the rest of SWISSPROT and TrEMBL derived from the PRODOM database.

### Value

A list of Accession number.

### Author(s)

Ting-Yuan Liu

### References

http://www.sanger.ac.uk/Software/Pfam/ and ftp://ftp.sanger.ac.uk/pub/databases/Pfam/current_release/userman.txt

### Examples

    ## Not run:
        PFAMB2AC <- pfamPFAMB2AC()
        head(PFAMB2AC)
        pfamPFAMB2AC(pfamb=sample(names(PFAMB2AC), 3))
    ## End(Not run)

[Package PFAM version 1.14.1 Index]