pfamMIM2AC {PFAM} | R Documentation

## Mappings from MIM ID to Accession number

### Description

Mapping function from MIM ID (MIM) to the associated Accession number (AC)

### Usage

    pfamMIM2AC(mim=NULL)

### Arguments

`mim` | A character vector of MIM ID or NULL (default)

### Details

If `mim` is a vector of MIM ID, pfamMIM2AC will return a list of associated Accession number for the given `mim`. If `mim` is NULL, pfamMIM2AC(mim=NULL) (or pfamMIM2AC()) will return a list of associated Accession number for all the MIM ID in the database. Extra information: None More Details: MIM (a.k.a. OMIM, http://www.ncbi.nlm.nih.gov/omim/) is a catalog of human genes and genetic disorders authored and edited by Dr. Victor A. McKusick and his colleagues at Johns Hopkins and elsewhere. Reference: <MIM> MIM: McKusick, V.A.: Mendelian Inheritance in Man. A Catalog of Human Genes and Genetic Disorders. Baltimore: Johns Hopkins University Press, 1998 (12th edition). <OMIM> Online Mendelian Inheritance in Man, OMIM (TM). McKusick-Nathans Institute for Genetic Medicine, Johns Hopkins University (Baltimore, MD) and National Center for Biotechnology Information, National Library of Medicine (Bethesda, MD), 2000

### Value

A list of Accession number.

### Author(s)

Ting-Yuan Liu

### References

http://www.sanger.ac.uk/Software/Pfam/ and ftp://ftp.sanger.ac.uk/pub/databases/Pfam/current_release/userman.txt

### Examples

    ## Not run:
        MIM2AC <- pfamMIM2AC()
        head(MIM2AC)
        pfamMIM2AC(mim=sample(names(MIM2AC), 3))
    ## End(Not run)

[Package PFAM version 1.14.1 Index]