pfamPRINTS2AC {PFAM} | R Documentation

## Mappings from PRINTS ID to Accession number

### Description

Mapping function from PRINTS ID (PRINTS) to the associated Accession number (AC)

### Usage

    pfamPRINTS2AC(prints=NULL)

### Arguments

`prints` | A character vector of PRINTS ID or NULL (default)

### Details

If `prints` is a vector of PRINTS ID, pfamPRINTS2AC will return a list of associated Accession number for the given `prints`. If `prints` is NULL, pfamPRINTS2AC(prints=NULL) (or pfamPRINTS2AC()) will return a list of associated Accession number for all the PRINTS ID in the database. Extra information: None More Details: PRINTS (http://umber.sbs.man.ac.uk/dbbrowser/PRINTS/) is a compendium of protein fingerprints.

### Value

A list of Accession number.

### Author(s)

Ting-Yuan Liu

### References

http://www.sanger.ac.uk/Software/Pfam/ and ftp://ftp.sanger.ac.uk/pub/databases/Pfam/current_release/userman.txt

### Examples

    ## Not run:
        PRINTS2AC <- pfamPRINTS2AC()
        head(PRINTS2AC)
        pfamPRINTS2AC(prints=sample(names(PRINTS2AC), 3))
    ## End(Not run)

[Package PFAM version 1.14.1 Index]