\HeaderA{hgu133plus2PFAM}{Map Manufacturer IDs to Pfam IDs}{hgu133plus2PFAM}
\keyword{datasets}{hgu133plus2PFAM}
\begin{Description}\relax
hgu133plus2PFAM is an R object that provides mappings between a
manufacturer identifier and the associated Pfam identifiers.
\end{Description}
\begin{Details}\relax
Each manufacturer identifier maps to a named vector of Pfam identifiers.  The name
for each Pfam identifier is the IPI accession numbe where this Pfam identifier is found.

If the Pfam is a named NA, it means that the associated Entrez Gene id
of this manufacturer identifier is found in an IPI entry of the IPI database,
but there is no Pfam identifier in the entry.

If the Pfam is a non-named NA, it means that the associated Entrez Gene id
of this manufacturer identifier is not found in any IPI entry of the IPI database.

Mappings were based on data provided by: The International Protein Index ( ftp://ftp.ebi.ac.uk/pub/databases/IPI/current ) on 2007-Aug08
\end{Details}
\begin{References}\relax
Kersey P. J., Duarte J., Williams A., Karavidopoulou Y., Birney E., Apweiler R.
The International Protein Index: An integrated database for proteomics experiments.
Proteomics 4(7): 1985-1988 (2004)
\url{http://www.ebi.ac.uk/IPI/IPIhelp.html}
\end{References}
\begin{Examples}
\begin{ExampleCode}
        x <- hgu133plus2PFAM
        # Get the probe identifiers that are mapped to any Pfam ID
        mapped_probes <- mappedkeys(x)
        # Convert to a list
        xx <- as.list(x[mapped_probes])
        # randomly display 10 probes
        sample(xx, 10)
\end{ExampleCode}
\end{Examples}

