Affymetrix Murine Genome 19k Set Annotation Data (mu19ksubb)


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Documentation for package ‘mu19ksubb’ version 2.0.1

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mu19ksubb Bioconductor annotation data package
mu19ksubbACCNUM Map Manufacturer identifiers to GenBank Accession Numbers
mu19ksubbCHR Map Manufacturer IDs to Chromosomes
mu19ksubbCHRLENGTHS A named vector for the length of each of the chromosomes
mu19ksubbCHRLOC Map Manufacturer IDs to Chromosomal Location
mu19ksubbENTREZID Map between Manufacturer Identifiers and Entrez Gene
mu19ksubbENZYME Map Between Manufacturer IDs and Enzyme Commission (EC) Numbers
mu19ksubbENZYME2PROBE Map Between Enzyme Commission Numbers and Manufacturer Identifiers
mu19ksubbGENENAME Map Between Manufacturer IDs and Genes
mu19ksubbGO Map between Manufacturer IDs and Gene Ontology (GO)
mu19ksubbGO2ALLPROBES Map Between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
mu19ksubbGO2PROBE Map Between Gene Ontology (GO) and Manufacturer Identifiers
mu19ksubbLOCUSID Map between Manufacturer Identifiers and Entrez Gene
mu19ksubbMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
mu19ksubbMAPCOUNTS Quality control information for mu19ksubb
mu19ksubbORGANISM The Organism for mu19ksubb
mu19ksubbPATH Mappings between probe identifiers and KEGG pathway identifiers
mu19ksubbPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
mu19ksubbPFAM Map Manufacturer IDs to Pfam IDs
mu19ksubbPMID Map between Manufacturer Identifiers and PubMed Identifiers
mu19ksubbPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
mu19ksubbPROSITE Map Manufacturer IDs to PROSITE ID
mu19ksubbQC Quality control information for mu19ksubb
mu19ksubbQCDATA Quality control information for mu19ksubb
mu19ksubbREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
mu19ksubbSYMBOL Map between Manufacturer Identifiers and Gene Symbols
mu19ksubbUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers