Clontech BD Atlas Long Oligos Rat 4K annotation data (chip rguatlas4k)


[Package List] [Top]

Documentation for package ‘rguatlas4k.db’ version 2.0.2

Help Pages

rguatlas4k Bioconductor annotation data package
rguatlas4kACCNUM Map Manufacturer identifiers to GenBank Accession Numbers
rguatlas4kALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
rguatlas4kCHR Map Manufacturer IDs to Chromosomes
rguatlas4kCHRLENGTHS A named vector for the length of each of the chromosomes
rguatlas4kCHRLOC Map Manufacturer IDs to Chromosomal Location
rguatlas4kENTREZID Map between Manufacturer Identifiers and Entrez Gene
rguatlas4kENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
rguatlas4kENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
rguatlas4kGENENAME Map between Manufacturer IDs and Genes
rguatlas4kGO Map between Manufacturer IDs and Gene Ontology (GO)
rguatlas4kGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
rguatlas4kGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
rguatlas4kLOCUSID Map between Manufacturer Identifiers and Entrez Gene
rguatlas4kMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
rguatlas4kMAPCOUNTS Number of mapped keys for the maps in package rguatlas4k.db
rguatlas4kORGANISM The Organism for rguatlas4k
rguatlas4kPATH Mappings between probe identifiers and KEGG pathway identifiers
rguatlas4kPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
rguatlas4kPFAM Map Manufacturer IDs to Pfam IDs
rguatlas4kPMID Map between Manufacturer Identifiers and PubMed Identifiers
rguatlas4kPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
rguatlas4kPROSITE Map Manufacturer IDs to PROSITE ID
rguatlas4kREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
rguatlas4kSYMBOL Map between Manufacturer Identifiers and Gene Symbols
rguatlas4kUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
rguatlas4k_dbconn Collect information about the package annotation DB
rguatlas4k_dbfile Collect information about the package annotation DB
rguatlas4k_dbInfo Collect information about the package annotation DB
rguatlas4k_dbschema Collect information about the package annotation DB