# Various data sets for use with the puma package

## Documentation for package ‘pumadata’ version 1.99.4

- DESCRIPTION file.
- Overview of user guides and package vignettes; browse directory.

## Help Pages

affybatch.estrogen | The data from the estrogen package as an AffyBatch object
eset_estrogen_comb | The data from the estrogen package processed using the multi-mgMOS and PUMAcomb algorithms
eset_estrogen_mmgmos | The data from the estrogen package processed using the multi-mgMOS algorithm
eset_estrogen_pmmmgmos | The data from the estrogen package processed using the multi-mgMOS use PM intensities only
eset_estrogen_rma | The data from the estrogen package processed using the RMA algorithm
Human_Location | The coordinates of probes and the mapped PM for human exon chips
Human_probes_transcripts | The number of probes and the number of transcripts mapped to each gene for human exon chips
Human_transcript_name | The names of transcripts mapped to each gene for human exon chips
Human_transcript_NO | The coordinates of probes and the mapped transcripts for human exon chips
Mouse_Location | The coordinates of probes and the mapped PM for Mouse exon chips
Mouse_probes_transcripts | The number of probes and the number of transcripts mapped to each gene for mouse exon chips
Mouse_transcript_name | The names of transcripts mapped to each gene for mouse exon chips
Mouse_transcript_NO | The coordinates of probes and the mapped transcripts mapped for mouse exon chips
pumapca_estrogen | The data from the estrogen package processed using the pumaPCA algorithm
Rat_Location | The coordinates of probes and the mapped PM for Rat exon chips
Rat_probes_transcripts | The number of probes and the number of transcripts mapped to each gene for rat exon chips
Rat_transcript_name | The names of transcripts mapped to each gene for rat exon chips
Rat_transcript_NO | The coordinates of probes and the mapped transcripts for rat exon chips