CNORfeeder-package |
R package to integrate literature-constrained and data-driven methods to infer signalling networks from perturbation experiments |
Binference |
Bayesian network inference |
CNORfeeder |
R package to integrate literature-constrained and data-driven methods to infer signalling networks from perturbation experiments |
gaBinaryT1W |
Genetic algorithm used to optimise a model differently weighting links |
linksRanking |
Ranking of links inferred from data |
makeBTables |
Make Boolean tables |
mapBTables2model |
Integrate Boolean tables with the model |
mapDDN2model |
Integrate data-drive network with the model |
MIinference |
Mutual information based network inference |
PPINigraph |
Protein-protein interaction netwrok |
UniprotIDdream |
Uniprot identifiers for proteins in DreamModel |
weighting |
Weight integrated links. |