layoutDaylight {ggtree} | R Documentation |
#' @title
layoutDaylight(tree, branch.length)
tree |
phylo object |
branch.length |
set to 'none' for edge length of 1. Otherwise the phylogenetic tree edge length is used. |
tree as data.frame with equal angle layout.
The following aglorithm aims to implement the vague description of the "Equal-daylight Algorithm" in "Inferring Phylogenies" pp 582-584 by Joseph Felsenstein.
“' Leafs are subtrees with no children Initialise tree using equal angle algorithm tree_df = equal_angle(tree)
nodes = get list of nodes in tree_df breadth-first nodes = remove tip nodes.
“'