Package: methylPipe
Type: Package
Title: Base resolution DNA methylation data analysis
Version: 1.16.0
Date: 2016-03-16
Author: Kamal Kishore
Maintainer: Kamal Kishore <kamal.fartiyal84@gmail.com>
Description: Memory efficient analysis of base resolution DNA methylation data in both 
  the CpG and non-CpG sequence context. Integration of DNA methylation data derived from 
  any methodology providing base- or low-resolution data.
License: GPL(>=2)
LazyLoad: yes
Imports: marray, gplots, IRanges, BiocGenerics, Gviz,
        GenomicAlignments, Biostrings, parallel, data.table,
        GenomeInfoDb, S4Vectors
Depends: R (>= 3.2.0), methods, grDevices, graphics, stats, utils,
        GenomicRanges, SummarizedExperiment (>= 0.2.0), Rsamtools
Suggests: BSgenome.Hsapiens.UCSC.hg18,
        TxDb.Hsapiens.UCSC.hg18.knownGene, knitr, MethylSeekR
VignetteBuilder: knitr
biocViews: MethylSeq, DNAMethylation, Coverage, Sequencing
git_url: https://git.bioconductor.org/packages/methylPipe
git_branch: RELEASE_3_8
git_last_commit: 0cc3f02
git_last_commit_date: 2018-10-30
Date/Publication: 2018-10-30
NeedsCompilation: yes
Packaged: 2018-10-31 00:40:53 UTC; biocbuild
Built: R 3.5.1; x86_64-apple-darwin15.6.0; 2018-10-31 09:11:34 UTC; unix
