plot.aneuHMM {AneuFinder} | R Documentation

## Plotting function for `aneuHMM` objects

### Description

Make different types of plots for `aneuHMM` objects.

### Usage

    ## S3 method for class 'aneuHMM'
    plot(x, type = "profile", ...)

### Arguments

`x` | An `aneuHMM` object.
`type` | Type of the plot, one of `c('profile', 'histogram', 'karyogram')`. You can also specify the type with an integer number. `karyogram` A karyogram-like chromosome overview with CNV-state. `histogram` A histogram of binned read counts with fitted mixture distribution. `karyogram` An profile with read counts and CNV-state.
`...` | Additional arguments for the different plot types.

### Value

A `ggplot` object.

[Package AneuFinder version 1.10.2 Index]