drawBubbles {BubbleTree} | R Documentation

## drawBubbles

### Description

draw the Bubbles

### Usage

    drawBubbles(.Object, rbd, col = NULL)

    ## S4 method for signature 'BTreePlotter'
    drawBubbles(.Object, rbd, col = "gray80")

### Arguments

`.Object` | the object
`rbd` | the rbd object
`col` | the col value

### Value

draw the bubbles on the track

### Examples

    load(system.file("data", "allCall.lst.RData", package="BubbleTree"))

    btreeplotter <- new("BTreePlotter", max.ploidy=5, max.size=10)
    nn <- "sam2"
    rbd1 <- allCall.lst[[nn]]@rbd
    rbd2 <- allCall.lst[[nn]]@rbd.adj
    arrows <- trackBTree(btreeplotter, rbd1, rbd2, min.srcSize=0.01,
                         min.trtSize=0.01)
    btree <- drawBTree(btreeplotter, rbd1) +
        drawBubbles(btreeplotter, rbd2, "gray80") + arrows

[Package BubbleTree version 2.12.0 Index]