pathwayMeasures {CHRONOS} | R Documentation

## Pathway structural and functional aspects

### Description

Pathway structural and functional aspects

### Usage

    pathwayMeasures(graphs)

### Arguments

`graphs` | Pathway graphs as returned from `createPathwayGraphs`.

### Details

Structural and functional aspects of a pathway are calculated in respect to all organism pathways.

### Value

Matrix with pathness, betweeness centrality and degree values for each gene in the pathway graphs at it's columns.

### Examples

    # Load pathway graphs from toy data
    load(system.file('extdata', 'Examples//data.RData', package='CHRONOS'))

    # Calculate pathway structural and functional aspects
    measures <- pathwayMeasures(graphs)

[Package CHRONOS version 1.10.1 Index]