BatchFluo {CONFESS} | R Documentation

## BatchFluo

### Description

It performs the run effect correction of the cell fluorescence signals by flexmix or 2-way ANOVA.

### Usage

    BatchFluo(data, maxMix, reference, prior.pi, flex.reps, flexmethod, seed)

### Arguments

`data` | List. A list of transformed and adjusted fluorescence signals.
`maxMix` | Integer. The maximum number of components to fit into the mixture of regressions model. If maxMix=1 or if the the optimal number of the estimated components is 1, the model reduces to the classical 2-way ANOVA.
`reference` | Numeric vector. Specifies the runs to be used as baseline (iteratively).
`prior.pi` | Float. The prior probability to accept a component.
`flex.reps` | Integer. The iterations of the Expectation-Maximization algorithm to estimate the flexmix model.
`flexmethod` | Character string. A method to estimate the optimal number of flexmix components. One of "BIC", "AIC", "ICL".
`seed` | Integer. An optional seed number for the Random Number Generator.

### Value

A list of fluorescence signals, mixture components and flexmix model estimates

[Package CONFESS version 1.10.1 Index]