load_ctd_dise {CTDquerier} | R Documentation

## Function to load the `.tsv.gz` file for disease

### Description

Function to load the `.tsv.gz` file for disease

### Usage

    load_ctd_dise(filename = "CTD_diseases.tsv.gz")

### Arguments

`filename` | (default "CTD_diseases.tsv.gz") File with the chemicals downloaded from CTDbase.

### Details

The field included in the file (`CTD_diseases.tsv.gz`) are:

1. DiseaseName

2. DiseaseID (MeSH or OMIM identifier)

3. Definition

4. AltDiseaseIDs (alternative identifiers; '|'-delimited list)

5. ParentIDs (identifiers of the parent terms; '|'-delimited list)

6. TreeNumbers (identifiers of the disease's nodes; '|'-delimited list)

7. ParentTreeNumbers (identifiers of the parent nodes; '|'-delimited list)

8. Synonyms ('|'-delimited list)

9. SlimMappings (MEDIC-Slim mappings; '|'-delimited list)

### Value

A `data.frame` with the content of the file "CTD_genes.tsv.gz"

### Examples

    download_ctd_dise()
    fdl <- load_ctd_dise()
    dim( fdl )

[Package CTDquerier version 1.2.0 Index]