getAverageBindingValues {ChIPSeqSpike} | R Documentation

## Get the average binding values associated to a dataset

### Description

Accessor returning the average binding values associated to a dataset.

### Usage

    getAverageBindingValues(theObject)

    ## S4 method for signature 'ChIPSeqSpikeDataset'
    getAverageBindingValues(theObject)

    ## S4 method for signature 'ChIPSeqSpikeDatasetBoost'
    getAverageBindingValues(theObject)

    ## S4 method for signature 'ChIPSeqSpikeCore'
    getAverageBindingValues(theObject)

### Arguments

`theObject` | A `ChIPSeqSpikeCore`, `ChIPSeqSpikeDataset` or `ChIPSeqSpikeDatasetBoost` object.

### Details

Each element of the list contains the binding values to perform meta-profile (see ?plotProfile); transformation profiles if not in boost mode (see ?plotTransform) and heatmaps (see ?plotHeatmaps). These values are stored in a plotSetArray object. This object is created by the method getPlotSetArray of the 'seqplots' package.

### Value

A list of plotSetArray objects.

### Author(s)

Nicolas Descostes

### See Also

`plotProfile` `plotTransform` `plotHeatmaps` `getMatBindingValues` `getPlotSetArray`

### Examples

    data(result_extractBinding)
    getAverageBindingValues(csds[[1]])

[Package ChIPSeqSpike version 1.2.1 Index]