DESeq2Data {DChIPRep} | R Documentation

## Accessors for the 'DESeq2Data' slot of a `DChIPRepResults` object.

### Description

The slot contains the DESeqDataSet as it is obtained after the initial data import. The DESeqDataSet contains the counts per position and the normalization factors as computed using the input counts.

### Usage

    ## S4 method for signature 'DChIPRepResults'
    DESeq2Data(object)

    ## S4 replacement method for signature 'DChIPRepResults,DESeqDataSet'
    DESeq2Data(object) <- value

### Arguments

`object` | a `DChIPRepResults` object
`value` | A DESeqDataSet object

### Value

the DESeq2Data object contained in the DChIPRepResults object

### Examples

    data(testData)
    dcr <- DChIPRepResults(testData)
    DESeq2Data(dcr)

[Package DChIPRep version 1.12.0 Index]