degObj {DEGreport} | R Documentation

## Create a deg object that can be used to plot expression values at shiny server:runGist(9930881)

### Description

Create a deg object that can be used to plot expression values at shiny server:runGist(9930881)

### Usage

    degObj(counts, design, outfile)

### Arguments

`counts` | Output from get_rank function.
`design` | Colour used for each gene.
`outfile` | File that will contain the object.

### Value

R object to be load into vizExp.

### Examples

    data(humanGender)
    library(SummarizedExperiment)
    degObj(assays(humanGender)[[1]], colData(humanGender), NULL)

[Package DEGreport version 1.18.1 Index]