saveGRangesAsBed {DEScan2} | R Documentation

## saveGRangesAsBed

### Description

save a GRanges object as bed file.

### Usage

    saveGRangesAsBed(GRanges, filepath = tempdir(), filename = tempfile(),
      force = FALSE, verbose = FALSE)

### Arguments

`GRanges` | the GRanges object.
`filepath` | the path to store the files.@
`filename` | the name to give to the files.
`force` | force overwriting.
`verbose` | verbose output flag.

### Value

none

### Examples

    library("GenomicRanges")
    gr <- GRanges(
            seqnames=Rle(c("chr1", "chr2", "chr1", "chr3"), c(1, 3, 2, 4)),
            ranges=IRanges(1:10, end=10),
            strand=Rle(strand(c("-", "+", "*", "+", "-")), c(1, 2, 2, 3, 2)),
            seqlengths=c(chr1=11, chr2=12, chr3=13))

    saveGRangesAsBed(GRanges=gr, filepath=tempdir(), filename=tempfile(),
                        verbose=TRUE)

[Package DEScan2 version 1.2.1 Index]