cutGRangesPerChromosome {DEScan2} | R Documentation

## cutGRangesPerChromosome

### Description

takes in input a GRanges object, producing a LIST of GRanges, one for each chromosome.

### Usage

    cutGRangesPerChromosome(GRanges)

### Arguments

`GRanges` | a GRanges object.

### Value

a named list of GRanges, one for each chromosome.

### Examples

    library("GenomicRanges")
    gr <- GRanges(
            seqnames=Rle(c("chr1", "chr2", "chr1", "chr3"), c(1, 3, 2, 4)),
            ranges=IRanges(1:10, end=10),
            strand=Rle(strand(c("-", "+", "*", "+", "-")), c(1, 2, 2, 3, 2)),
            seqlengths=c(chr1=11, chr2=12, chr3=13))
    (grchrlist <- cutGRangesPerChromosome(gr))

[Package DEScan2 version 1.2.1 Index]