5b81fb4d1878a998a73845e942fc22e0 *CITATION
1c2469fd6d886e2f35dc1d9cc516394a *DESCRIPTION
c6501955c535085ea3fc41ffed11b1c7 *INDEX
df76f53a83a5637f0ca94c81752ebb6c *Meta/Rd.rds
2d260760e3b21d7614a9a450ee560c4b *Meta/data.rds
77a30dbd9a48297ae6e6ef2194a95267 *Meta/features.rds
2472db6072cf844fb01e37ca2bd0eea2 *Meta/hsearch.rds
9460bb3bcffa72eab58819dd0cfde227 *Meta/links.rds
34bd9e1305e2ab64dfccad6e7b53283f *Meta/nsInfo.rds
f6685908b87e186f2781b90d5eb344bc *Meta/package.rds
856a00a132a1c6a1b286b4031517e88a *Meta/vignette.rds
115b7a62bddcccc96f4f0cd515642b79 *NAMESPACE
dd51e1db84256087fc65e4b57bf15a41 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/DMRcaller
b8f4b6ec10b6b2ee32e315cc92ac9b6d *R/DMRcaller.rdb
eda78ab8c183cf938bb4fe00dba2f8b0 *R/DMRcaller.rdx
2253e7bffbffad160a29fa048fa2012d *data/DMRsNoiseFilterCG.RData
2b45c1f38b8ae6ad528642223b292c3b *data/GEs.RData
1171d29fd955c635be3f364c26f7e78e *data/datalist
83ead4ae7d62dd4ed1ed3669e5a77365 *data/methylationDataList.RData
b3ad8509713fbc7abfc86a6566c8c5a2 *data/syntheticDataReplicates.RData
816c9d56e923f27493354b7e74ca1266 *doc/DMRcaller.R
cc4003906cba39ef430a424f3711f290 *doc/DMRcaller.Rnw
a4219f77a1957e46fed031ebfa9c9290 *doc/DMRcaller.pdf
92c032184932c52f909061b5d56349ee *doc/index.html
f8b08ba2d0a5c9c78e7f6eb87c9a0e2b *help/AnIndex
1529fe8e813929039ba294f19ebad078 *help/DMRcaller.rdb
cca429191fb3dfc53d856e5a3fe331bd *help/DMRcaller.rdx
b77e25a6b00851dd96d62009b45ba805 *help/aliases.rds
46208e45a3bb7deb6d5ab4286d79cb89 *help/paths.rds
ce58e915f6bd12381dbdfda86007457f *html/00Index.html
7553ba5c8d3d145a3a0ed8436b88e706 *html/DMRcaller.html
044d4c9901e99cab4f3cf22ae020d076 *html/DMRsNoiseFilterCG.html
530eb7e8e1c1083eeaeb4c9a1ceb39fb *html/GEs.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
6cde3e58423e8d90a8fa3a18e800643f *html/analyseReadsInsideRegionsForCondition.html
56b5d06b1e71339bc78f6d4d2242a36a *html/computeDMRs.html
db4d6305d5b2f45c096f747f34f51694 *html/computeDMRsReplicates.html
c8a1f401f32ce64b98ca40d2b152c1ca *html/computeMethylationDataCoverage.html
805c1c0e367d077d87f73b2a71093118 *html/computeMethylationDataSpatialCorrelation.html
78d6976e541eace877855a4a7373bb62 *html/computeMethylationProfile.html
958f9b659872f564f36b3a12363f65f9 *html/computeOverlapProfile.html
ac4b9c5b4ccee56a33f01754fdba7c4b *html/extractGC.html
e0bd8cd43b3f48b964bd6ec5dc234bc2 *html/filterDMRs.html
ca0bb123f341988c9d93d63091b02ef3 *html/getWholeChromosomes.html
27ff42ab74d31da112acaaaf0d93e369 *html/joinReplicates.html
9a409d4bec3ad4ecb85812dfbce3e537 *html/mergeDMRsIteratively.html
f8426fc8028bd78c275427cbf7978d93 *html/methylationDataList.html
36870113ad5d0c20f7dc8a2b18eaab46 *html/plotLocalMethylationProfile.html
a904d9faf1a6c38862df7dc2ddc3598f *html/plotMethylationDataCoverage.html
2985592bf2418829bd7c67158f9d6388 *html/plotMethylationDataSpatialCorrelation.html
6be3ae410417c889cb5745d1f77930a2 *html/plotMethylationProfile.html
efc931ed33effac5aaef81c1ed3c2ae6 *html/plotMethylationProfileFromData.html
360fc9bf5771f37627a8065e797fee41 *html/plotOverlapProfile.html
30306d7a6f0b2db5cd88bb4356f48882 *html/poolMethylationDatasets.html
5109cc3432fed43974029ca5743aff6d *html/poolTwoMethylationDatasets.html
2f2593f280fbe6412358f65239e1e79a *html/readBismark.html
b50617d6a387a47a0d2c9b5987891734 *html/readBismarkPool.html
1d50cc193eaf98e1e4a3fd1582ccbc54 *html/saveBismark.html
ce3c3a45da58509a29a2b3c06ca7b86e *html/syntheticDataReplicates.html
ff3371d047e32b593a502c2b41a7985c *unitTests/test_computeDMRs.R
