prepare_ENCODEdb {ENCODExplorer} | R Documentation

## Create the list of data.table for the tables in ENCODE

### Description

Create the list of data.table for the tables in ENCODE

### Usage

    prepare_ENCODEdb(database_filename = "inst/extdata/tables.RDA",
      types = get_encode_types(), overwrite = FALSE)

### Arguments

`database_filename` | The name of the file to save the database into.
`types` | The names of the tables to extract from ENCODE rest api.
`overwrite` | Should tables already present in database be overwrited Default: `FALSE`.

### Value

is a `list` with selected tables from ENCODE that were used to create the list of `data.table` .

### Examples

    prepare_ENCODEdb(database_filename = "tables.RDA", types = "platform")
    file.remove("platform.RDA")
        ## Not run:
            prepare_ENCODEdb("ENCODEdb.RDA")

    ## End(Not run)

[Package ENCODExplorer version 2.8.0 Index]