afbab41deb028b92d4738c0e9cd8e4d2 *DESCRIPTION
9edecc22e8a58a99e24ef228c8c0e5c1 *INDEX
2f745756b72c8b2fba5a1c90c374bb71 *Meta/Rd.rds
429724b30f0322e2d56778dd130867d3 *Meta/features.rds
edaddfa83eb5f929b5e8168c64108f51 *Meta/hsearch.rds
a20ab4fc7d6dabb856b8a9227bc2a08b *Meta/links.rds
8e60f456899f2a0c71a1a8632460e594 *Meta/nsInfo.rds
1d321a16273676fb38359538f82780ae *Meta/package.rds
68c4429d1170aefbd4ff2b48504d09ed *Meta/vignette.rds
6b0b8edb3fed9c97436eadeec330f310 *NAMESPACE
6e87938fd077ec5c682f85cf5510b5f3 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/FindMyFriends
b2ebcc48234610a51fbc9c00237d57bc *R/FindMyFriends.rdb
2e922f24d762e05d8b8ef6aeff6e478f *R/FindMyFriends.rdx
1dbd5d17d6b5a02c218105f7118f5989 *doc/FindMyFriends_intro.R
f81e3e59a6933dd142a3816763cef4dd *doc/FindMyFriends_intro.Rmd
f58bde8e59cb755bc1fdb13ca660f63d *doc/FindMyFriends_intro.html
8d19751bcdc17fdbdbff53bcf1ee2e60 *doc/index.html
fa46e1011a04ec09310d7e0e02add746 *extdata/Mycoplasma.zip
1e5bee3f07405b335c2b85b200524867 *extdata/examplePG/example.annot
915ea4715c2f07af1daa3f0299dbb858 *extdata/examplePG/groupsNS.txt
4ab5ee4efeaade14d15df92b1eb04020 *extdata/examplePG/groupsWG.txt
6b8fa4249be53ba59699e82260b97d61 *extdata/examplePG/paraNS.txt
b9fb498e4ff448e0d2f9b3ce9a4df4f2 *extdata/examplePG/paraWG.txt
4d3d4c9cb4a952dc86ef25e5c5189ce4 *help/AnIndex
b386f0c1e5a9713425ed7c916cae8946 *help/FindMyFriends.rdb
9f73529064ba97e6bf9f17ebafb51127 *help/FindMyFriends.rdx
9d605ee04b2f574994474aed78bf80e0 *help/aliases.rds
d1e9cca5fa03c695844465e0fb186388 *help/paths.rds
58a96239c489029d4518b4de63105925 *html/00Index.html
fa385c8c24bb50ac7f56e1db45344269 *html/FindMyFriends-package.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
294caf4b353d8a81da3e06675bb8d67d *html/addGenomes.html
00cdb753bf89dc855134a618658dc246 *html/addGroupInfo.html
5c1befa876a0df38bcd505a3e3c20962 *html/addOrgInfo.html
a00b5344dda3de517ed0f2c5f09734dc *html/cdhitGrouping.html
26f7cf3611a02db64520969db6e31d4b *html/collapseParalogues.html
3c4f9da289f6da794ee9e33bf15c6501 *html/defaults.html
e0d302254e0dccae29c3a28f659bc674 *html/fillDefaults.html
d479752cd0de5f629ac8391c25b78cb2 *html/geneLocation.html
5d9f8acb591c3babd52d883a79ae6308 *html/geneNames.html
e352409d0628e198078773dc61c63165 *html/geneWidth.html
81080e34a52d5ff0e27198223723fd4a *html/genes.html
e24fd9a732c140c495b024cb2228e9f1 *html/getNeighborhood.html
cff51e292dc6d34bee64dc7cefcbfaf0 *html/getRep.html
dfb27194c0ee9668c5fb7081e59f2938 *html/gpcGrouping.html
c1f5627ec1bdd0388133c10be650b47d *html/graphGrouping.html
0ff8dab954d719570b30b113656b5b8a *html/groupInfo.html
cbadb6220f6ddc19568b54508a545dac *html/groupNames.html
02061c9f01c02bdbffe50b0e3aed0249 *html/groupStat.html
f63a380e7f7b80b5ec79cfb45f133609 *html/hasGeneGroups.html
4056ea7d8496f84e910fc4e87f0586e2 *html/hasGeneInfo.html
f80a35c09d55c0ae616de85165710d39 *html/hasParalogueLinks.html
136b957870dbd75584c6126d5dbc30ba *html/internalGroupGenes.html
b3b114630f1e84ee6c022cb57a75d72d *html/internalMergePangenomes.html
e4dae811985e0d472d6a0a78c22dbb51 *html/internalMetadata.html
402fa995b1277a9f0c52c432da4d12be *html/kmerLink.html
e4491864ce3d4525f5e277d939b39002 *html/kmerSimilarity.html
2b8aa724968b1819d44ec7761d8c6214 *html/kmerSplit.html
ee556a0cb750c00ffcd62049fe50ae3d *html/loadPgExample.html
0f2b8feacce29bda7b9cca85b4e0a82b *html/manualGrouping.html
e49c634bca4b9f7118594a3d5ced8146 *html/nGeneGroups.html
2d066ce553a493b4efac6b65bd3f8c3e *html/nGenes.html
6e8e49cac877e05c5a5ab63bf5f4330b *html/nOrganisms.html
b36c5d3b9590fe9cb820ae06df6f2b94 *html/neighborhoodSplit.html
c0b458150d26d0997b8eed6a7ca4982b *html/orgInfo.html
e02a6c2dbe61f370a1fe32a1f7ada6ad *html/orgNames.html
495f526778f1d323b38659bac4b4a61d *html/orgStat.html
9379ce14129baf1f35539549c0f1bf95 *html/pangenome.html
c556e44594a2f8bf099533aa0475eb11 *html/pcGraph.html
f844591e34a174f540056bb1bfb432b3 *html/pgFull-class.html
371f51ba1fc199a87f3894de502b9c25 *html/pgFullLoc-class.html
adada0fdb1d15c0cebbc3c77a599c111 *html/pgInMem-class.html
c7c84267f6664f095dae4176e3d12bab *html/pgInMemLoc-class.html
b90dba80b3ec2a4b9169ebd55395eae6 *html/pgLM-class.html
813f369f55066bb8433b4b19291f843d *html/pgLMLoc-class.html
1efd5efcb75e667d169986197d030326 *html/pgMatrix.html
3c47b4782e152dabbb3e01cd8620dd46 *html/pgSlim-class.html
cda2b5a4c7ba0dd1690cfc61b180f88a *html/pgSlimLoc-class.html
d37217099f56f1488ae0f31351f67bed *html/pgVirtual-class.html
e7a7ddc3db14718ad4298bd1d773019d *html/pgVirtualLoc-class.html
89aff23e3bcc2f8cf4fec8b358252686 *html/plotEvolution.html
18ddd3ebf7431a01940a0c9c5bedb09e *html/plotGroup.html
27477715283738abb283f89a291e5c9e *html/plotNeighborhood.html
2ba1b66e8e4e19c2c3a2c3eccd5c5b17 *html/plotSimilarity.html
4d2ab65095dc2bcabcd90fdb86c5e24c *html/plotStat.html
18b4839c30d12353780f51c267d284c9 *html/plotTree.html
22449f208d8ab066a3281d802d6201d0 *html/readAnnot.html
26edf7717f668ea1bf551d78f7f55149 *html/removeGene.html
5345a3b8fe62532726f9f7019f930ae2 *html/reportGroupChanges.html
2f153ff7f3866907343dc9302104ad9b *html/seqToGeneGroup.html
2456d25f7fb58fee2de99db31017e578 *html/seqToOrg.html
3bf4929b9768824a424a93d6c42cadb4 *html/translated.html
625d27d5525368e07ad42deb7a3da697 *html/variableRegions.html
6f2a09b9b8325db6024b5548202a03ad *libs/i386/FindMyFriends.dll
5ba69c2748fd8714d4b861d20fa5d6e0 *libs/x64/FindMyFriends.dll
