GOstats-defunct {GOstats} | R Documentation

## Defunct Functions in GOstats Package

### Description

The functions or variables listed here are no longer part of GOstats as they are not needed (any more).

### Usage

    combGOGraph()
    hyperGtable()
    hyperG2Affy()
    selectedGenes()
    GOHyperG()
    GOKEGGHyperG()
    getGoGraph()

### Details

`combGOGraph` was replaced by `join`. `hyperGtable` was replaced by `summary`. `hyperG2Affy` was replaced by `probeSetSummary`. `GOLeaves` was replaced by `graph::leaves`. `selectedGenes` was replaced by `geneIdsByCategory`. `GOHyperG` was replaced by `hyperGTest`. `GOKEGGHyperG` was replaced by `hyperGTest`. `getGoGraph` was replaced by `GOGraph`.

[Package GOstats version 2.48.0 Index]