topREACTOME.PATH {GeneAnswers} | R Documentation

## Present top REACTOME.PATH enrichment test information

### Description

Function to present top REACTOME.PATH enichmentInfo of given GeneAnswers instance.

### Usage

    topREACTOME.PATH(x, catTerm = TRUE, keepID=TRUE, ...)

### Arguments

`x` | a given GeneAnswers instance containing REACTOME.PATH information
`catTerm` | logic value to determine whether mapping to REACTOME.PATH terms or not
`keepID` | logic value to determine whether showing REACTOME.PATH IDs or not
`...` | other parameters to transfer to topCategory

### Value

print necessary information on the screen and save into a specified file if request.

### Author(s)

Gang Feng, Pan Du and Simon Lin

### References

Feng, G., Du, P., Krett, N., Tessel, M., Rosen, S., Kibbe, W.A. and Lin, S.M., 'A collection of bioconductor methods to visualize gene-list annotations', BMC Research Notes 2010, 3:10

### See Also

`topCategory`

### Examples

    # x is a GeneAnswers instance with REACTOME.PATH test
    ## Not run: topREACTOME.PATH(x, top=10)

[Package GeneAnswers version 2.24.0 Index]