readCounts {GeneStructureTools} | R Documentation

## Method readCounts

### Description

Method readCounts

### Usage

    readCounts(whippetDataSet)

    ## S4 method for signature 'whippetDataSet'
    readCounts(whippetDataSet)

### Arguments

`whippetDataSet` | whippetDataSet generated from `readWhippetDataSet()`

### Value

whippet read count data.frame (originally from a whippet .psi file)

### See Also

Other whippet data processing: `coordinates`, `diffSplicingResults`, `filterWhippetEvents`, `formatWhippetEvents`, `junctions`, `readWhippetDIFFfiles`, `readWhippetDataSet`, `readWhippetJNCfiles`, `readWhippetPSIfiles`, `whippetTranscriptChangeSummary`

### Examples

    whippetFiles <- system.file("extdata","whippet/",
    package = "GeneStructureTools")
    wds <- readWhippetDataSet(whippetFiles)

    readCounts <- readCounts(wds)

[Package GeneStructureTools version 1.2.1 Index]