readWhippetDIFFfiles {GeneStructureTools} | R Documentation

## Read in a list of whippet .diff.gz files and format as a data.frame

### Description

Read in a list of whippet .diff.gz files and format as a data.frame

### Usage

    readWhippetDIFFfiles(files)

### Arguments

`files` | vector of *.diff.gz file names

### Value

data.frame with junction counts for all files

### Author(s)

Beth Signal

### See Also

Other whippet data processing: `coordinates`, `diffSplicingResults`, `filterWhippetEvents`, `formatWhippetEvents`, `junctions`, `readCounts`, `readWhippetDataSet`, `readWhippetJNCfiles`, `readWhippetPSIfiles`, `whippetTranscriptChangeSummary`

### Examples

    whippetFiles <- list.files(system.file("extdata","whippet/",
    package = "GeneStructureTools"), full.names = TRUE)
    diffFiles <- whippetFiles[grep(".diff", whippetFiles)]
    whippetDiffSplice <- readWhippetDIFFfiles(diffFiles)

[Package GeneStructureTools version 1.2.1 Index]