Package: INSPEcT
Type: Package
Title: Analysis of 4sU-seq and RNA-seq time-course data
Version: 1.12.2
Date: 2018-12-06
Author: Stefano de Pretis
Maintainer: Stefano de Pretis <ste.depo@gmail.com>
Description: INSPEcT (INference of Synthesis, Processing and 
	dEgradation rates from Transcriptomic data) RNA-seq data
	in time-course experiments or different conditions, with
	or without the support of nascent RNA data.
License: GPL-2
Depends: R (>= 3.2), methods, Biobase, BiocParallel
Imports: pROC, deSolve, rootSolve, compiler, preprocessCore,
        GenomicFeatures, GenomicRanges, IRanges, BiocGenerics,
        GenomicAlignments, Rsamtools, S4Vectors, DESeq2, plgem,
        SummarizedExperiment, TxDb.Mmusculus.UCSC.mm9.knownGene, shiny
Suggests: BiocStyle, knitr
VignetteBuilder: knitr
biocViews: Sequencing, RNASeq, GeneRegulation, TimeCourse,
        SystemsBiology
NeedsCompilation: no
RoxygenNote: 6.1.1
git_url: https://git.bioconductor.org/packages/INSPEcT
git_branch: RELEASE_3_8
git_last_commit: 4bd62ca
git_last_commit_date: 2019-04-04
Date/Publication: 2019-04-04
Packaged: 2019-04-05 03:11:10 UTC; biocbuild
Built: R 3.5.3; ; 2019-04-05 11:06:29 UTC; windows
