fisher.exact.test {InPAS} | R Documentation

## do fisher exact test for two group datasets

### Description

do fisher exact test for two group datasets

### Usage

    fisher.exact.test(UTR3eset, gp1, gp2)

### Arguments

`UTR3eset` | output of getUTR3eSet
`gp1` | tag names of group 1
`gp2` | tag names of group 2

### Value

a matrix of test results

### Author(s)

Jianhong Ou

### See Also

`singleSampleAnalyze`,`singleGroupAnalyze`, `limmaAnalyze`

### Examples

        path <- file.path(find.package("InPAS"), "extdata")
        load(file.path(path, "eset.MAQC.rda"))
        tags <- colnames(eset$PDUI.log2)
        res <- fisher.exact.test(eset, gp1=tags[1:2], gp2=tags[3:4])

[Package InPAS version 1.14.2 Index]