L1_DRG_20_example.loom {LoomExperiment} | R Documentation

## L1_DRG_20_example.loom

### Description

An example `hdf5` file in the Loom file format obtained from the Linnarson Lab.

The original file was imported using `LoomExperiment` and truncated using the package's subsetting methods. The purpose of this truncation was to reduce the total size of the data as the file's purpose is simply to demonstrate `LoomExperiment`'s functionality.

The data set has dimensions of 20x20. The file contains 7 `rowData` and 103 `colData` entries each corresponding to readings generated by high-throughput sequencing experiments. In addition, a `colGraphs` entry encoding a`LoomGraph` containing two `LoomGraph` objects are also included.

### Format

An hdf5 file in the Loom format

### Examples

    ## Load L1_DRG_20_example.loom using LoomExperiment's import() method
    l1_file <- system.file("extdata", "L1_DRG_20_example.loom", package = "LoomExperiment")
    scle <- import(l1_file, type="SingleCellLoomExperiment")
    scle

[Package LoomExperiment version 1.0.4 Index]